Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRC rs62432581 chr7:7737864 T/C 5.0E-5 526 38.47 48.63 5.47 KM Plot
KIRC rs62452711 chr7:46583042 C/T 7.46E-5 517 47.73 33.7 28.7 KM Plot
KIRC rs62568241 chr9:6711222 T/A 6.63E-6 513 42.33 39.62 20.67 KM Plot
KIRC rs62568243 chr9:6711377 T/A 2.02E-5 526 40.57 42.67 20.67 KM Plot
KIRC rs62568248 chr9:6714409 G/T 3.06E-5 519 40.28 42.67 20.67 KM Plot
KIRC rs62568249 chr9:6714808 C/G 3.22E-5 518 40.57 42.67 20.67 KM Plot
KIRC rs62569483 chr9:6719052 C/T 3.92E-5 516 40.78 43.15 19.68 KM Plot
KIRC rs6455971 chr6:165341140 A/G 3.95E-5 524 15.83 41.53 39.53 KM Plot
KIRC rs6455973 chr6:165341286 G/A 4.02E-5 524 15.83 39.17 39.62 KM Plot
KIRC rs6455974 chr6:165341329 T/C 4.02E-5 524 15.83 39.17 39.62 KM Plot
KIRC rs6456321 chr6:20276899 G/T 1.07E-8 521 9.02 35.83 43.68 KM Plot
KIRC rs6479558 chr9:97390617 A/G 1.43E-5 526 4.63 41.27 39.08 KM Plot
KIRC rs6548080 chr2:2616185 A/C 4.44E-5 522 39.38 40.1 8.35 KM Plot
KIRC rs6552879 chr4:186322637 A/C 9.09E-7 527 3.53 39 39.53 KM Plot
KIRC rs6552880 chr4:186323593 C/T 9.02E-7 527 3.53 39.5 39.38 KM Plot